BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012E09LP1|AL426381
(738 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1376 1420 0.0
>3x_Contig1376
Length = 7449
Score = 1420 bits (706), Expect = 0.0
Identities = 722/738 (97%)
Strand = Plus / Plus
Query: 1 gtagaaacaggaatacttaaktgtgttgccataacagtggtaacagcagcaccaagttca 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3315 gtagaaacaggaatacttaattgtgttgccataacagtggtaacagcagcaccaagttca 3374
Query: 61 acggagaaccctctggatggagattgcraaakcatcttgttacccaagttcttgatgatt 120
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 3375 acggagaaccctctggatggagattgcaaaatcatcttgttacccaagttcttgatgatt 3434
Query: 121 ctgtaaccgtatgtscaacaaccgaggaccaatgcagcggcacagtatgckaaaacccat 180
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3435 ctgtaaccgtatgtccaacaaccgaggaccaatgcagcggcacagtatgctaaaacccat 3494
Query: 181 gtgtgaacgtsagasttagattccacagtgtttttctgcsagatgtcatacacggcagck 240
|||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3495 gtgtgaacgtcagacttagattccacagtgtttttctgccagatgtcatacacggcagct 3554
Query: 241 agtggtgcagtggcgttggcaacatcattggcaccgtgagcraaagacatagtggcggcg 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 3555 agtggtgcagtggcgttggcaacatcattggcaccgtgagcaaaagacatagtggcggcg 3614
Query: 301 gtaatagcttgcragakagaatagatgaattcgattctgttgtcatagaaggcagatctc 360
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3615 gtaatagcttgcaagatagaatagatgaattcgattctgttgtcatagaaggcagatctc 3674
Query: 361 ttgtacatgtccttgaratctgttgacaaagcacctgtatcgtagacctgagaatgaata 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3675 ttgtacatgtccttgaaatctgttgacaaagcacctgtatcgtagacctgagaatgaata 3734
Query: 421 asatcttgagtccaaccgtgagaagcaatcaaccaaagtaatagaggccacttctttggt 480
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3735 acatcttgagtccaaccgtgagaagcaatcaaccaaagtaatagaggccacttctttggt 3794
Query: 481 ccttgttttagcaatgaccaccatagctgtttggtagttggtttttcttcttgcaaagtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3795 ccttgttttagcaatgaccaccatagctgtttggtagttggtttttcttcttgcaaagtt 3854
Query: 541 tctgtttgcaccaatttgatactttggttgasagattccttgtcgttaatttcaatatgt 600
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 3855 tctgtttgcaccaatttgatactttggttgacagattccttgtcgttaatttcaatatgt 3914
Query: 601 ccctctacagtatctcttccatcggcggtgtgggaagtttcaatttgggtttcatcatct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3915 ccctctacagtatctcttccatcggcggtgtgggaagtttcaatttgggtttcatcatct 3974
Query: 661 ccggcagtttcatcttcgaatcttctaccttcgtagtaatcaatggttaaakattgtcca 720
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 3975 ccggcagtttcatcttcgaatcttctaccttcgtagtaatcaatggttaaagattgtcca 4034
Query: 721 gcaggtagaggtggaatg 738
||||||||||||||||||
Sbjct: 4035 gcaggtagaggtggaatg 4052
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4259
Number of Sequences: 1807
Number of extensions: 4259
Number of successful extensions: 83
Number of sequences better than 1.0e-20: 1
length of query: 738
length of database: 10,358,551
effective HSP length: 16
effective length of query: 722
effective length of database: 10,329,639
effective search space: 7457999358
effective search space used: 7457999358
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.0 bits)